Folks Having problems compiling latest source code for Openbabel on Mac OS X (Lion). Don't think the error is a Mac issue, but I'll let you judge... Cmake and make output below.
Any ideas? Cheers, Ken cmake -DCMAKE_INSTALL_PREFIX=/usr/local -DPYTHON_BINDINGS=ON -DRUN_SWIG=ON -DEIGEN3_INCLUDE_DIR=/usr/local/include/eigen3 ../src -- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Checking whether C compiler has -isysroot -- Checking whether C compiler has -isysroot - yes -- Checking whether C compiler supports OSX deployment target flag -- Checking whether C compiler supports OSX deployment target flag - yes -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Checking whether CXX compiler has -isysroot -- Checking whether CXX compiler has -isysroot - yes -- Checking whether CXX compiler supports OSX deployment target flag -- Checking whether CXX compiler supports OSX deployment target flag - yes -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Using included inchi library. -- Found LibXml2: /usr/lib/libxml2.dylib -- Found ZLIB: /usr/lib/libz.dylib (found version "1.2.5") -- Could NOT find wxWidgets (missing: wxWidgets_FOUND) -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - not found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Could NOT find Cairo. PNG output will NOT be supported. -- Looking for getopt -- Looking for getopt - found -- GUI will not be built -- Found PythonInterp: /usr/bin/python (found version "2.7.1") -- Found SWIG: /Users/kws/swig200/bin/swig (found version "2.0.0") -- Found SWIG: /Users/kws/swig200/bin/swig (found suitable version "2.0.0", required is "2.0") -- Found PythonLibs: /usr/lib/libpython2.7.dylib -- Python bindings will be compiled -- Configuring done -- Generating done -- Build files have been written to: /Users/kws/Documents/code/openbabel_svn/build -> make Scanning dependencies of target openbabel [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.o [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/atom.o [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/base.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.o [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.o [ 2%] Building CXX object 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[ 24%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o [ 24%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o [ 25%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o [ 25%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o Linking CXX shared module ../lib/plugin_forcefields.so [ 25%] Built target plugin_forcefields Scanning dependencies of target plugin_ops [ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o [ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.o [ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o [ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o [ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.o [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.o [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp: In member function ‘virtual bool OpenBabel::OpConformer::Do(OpenBabel::OBBase*, const char*, const std::map<std::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<const std::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >*, OpenBabel::OBConversion*)’: /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:163: error: expected type-specifier before ‘OBMinimizingEnergyConformerScore’ /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:163: error: expected `)' before ‘OBMinimizingEnergyConformerScore’ /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:163: error: no matching function for call to ‘OpenBabel::OBConformerSearch::SetScore(int*)’ /Users/kws/Documents/code/openbabel_svn/src/include/openbabel/conformersearch.h:284: note: candidates are: void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*) /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:165: error: expected type-specifier before ‘OBMinimizingRMSDConformerScore’ /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:165: error: expected `)' before ‘OBMinimizingRMSDConformerScore’ /Users/kws/Documents/code/openbabel_svn/src/src/ops/conformer.cpp:165: error: no matching function for call to ‘OpenBabel::OBConformerSearch::SetScore(int*)’ /Users/kws/Documents/code/openbabel_svn/src/include/openbabel/conformersearch.h:284: note: candidates are: void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*) make[2]: *** [src/CMakeFiles/plugin_ops.dir/ops/conformer.o] Error 1 make[1]: *** [src/CMakeFiles/plugin_ops.dir/all] Error 2 make: *** [all] Error 2 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. 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