What was the output from running Cmake? I'm guessing that it did not run Swig.
- Noel On 29 July 2011 17:06, zhang.boyu84 <zhang.boy...@gmail.com> wrote: > I compiled the version in trunk, but I still get the same error: > Traceback (most recent call last): > File "calcrmsd.py", line 130, in <module> > main(input_ext, reference, output_ext, testfile, options.rmsd_cutoff) > File "calcrmsd.py", line 33, in main > align = pybel.ob.OBAlign() > AttributeError: 'module' object has no attribute 'OBAlign' > ----------------------------- > what I did is: > 1) delete the previous version (since I installed it locally, I just delete > the dirs) > 2) export from svn trunk > 3) compiled it with: cmake ../trunk/ -DRUN_SWIG=ON -DPYTHON_BINDINGS=ON > -DEIGEN2_INCLUDE=/pathto/eigen-2.0.15/eigen-eigen-0938af7840b0 and then > make, make install > 4) add path: export > PYTHONPATH=/usr/local/lib/python2.6/site-packages:$PYTHONPATH > export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH > > Is there anything else I need to change? Thanks a lot! > Boyu > > -- > View this message in context: > http://forums.openbabel.org/pybel-howto-calculation-of-RMSD-for-two-molecules-but-different-conformers-tp3338914p3704514.html > Sent from the General discussion mailing list archive at Nabble.com. > > ------------------------------------------------------------------------------ > Got Input? Slashdot Needs You. > Take our quick survey online. Come on, we don't ask for help often. > Plus, you'll get a chance to win $100 to spend on ThinkGeek. > http://p.sf.net/sfu/slashdot-survey > _______________________________________________ > OpenBabel-discuss mailing list > OpenBabel-discuss@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/openbabel-discuss > ------------------------------------------------------------------------------ Got Input? Slashdot Needs You. Take our quick survey online. Come on, we don't ask for help often. Plus, you'll get a chance to win $100 to spend on ThinkGeek. http://p.sf.net/sfu/slashdot-survey _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
