I compiled the version in trunk, but I still get the same error:
Traceback (most recent call last):
File "calcrmsd.py", line 130, in <module>
main(input_ext, reference, output_ext, testfile, options.rmsd_cutoff)
File "calcrmsd.py", line 33, in main
align = pybel.ob.OBAlign()
AttributeError: 'module' object has no attribute 'OBAlign'
-----------------------------
what I did is:
1) delete the previous version (since I installed it locally, I just delete
the dirs)
2) export from svn trunk
3) compiled it with: cmake ../trunk/ -DRUN_SWIG=ON -DPYTHON_BINDINGS=ON
-DEIGEN2_INCLUDE=/pathto/eigen-2.0.15/eigen-eigen-0938af7840b0 and then
make, make install
4) add path: export
PYTHONPATH=/usr/local/lib/python2.6/site-packages:$PYTHONPATH
export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
Is there anything else I need to change? Thanks a lot!
Boyu
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