On 25/11/2010 16:33, Prashanth Athri wrote:
> When I convert to gr96 (gromos), all distance are off by a factor --
> the molecule is expanded. I think this might be becauseGromos uses
> nanometers as its units (not anstroms), Babel is probably not
> factoring this in? Or maybe I am missing something.

I think you can use either.

Briefly:
  obabel -L gr96

or at greater length:
http://openbabel.svn.sourceforge.net/viewvc/openbabel/openbabel/tags/openbabel-2-3-0/src/formats/gromos96format.cpp?revision=4275&view=markup

Chris

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