The error messages are showing below:
----------------------------------------------
WARNING: Problems reading a PDB file
Problems reading a HETATM or ATOM record.
According to the PDB specification,
columns 77-78 should contain the element symbol of an atom.
----------------------------------------------

Please note that the columns 77-78 in PDB format are optional. Actually, 
columns 77-78 are usually missed for the hetero atoms (ligands) in PDB 
database. It would be more applicable to read columns 13-14 for atom name.

Shawn

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