See <https://builds.apache.org/job/ctakes-trunk-package/701/display/redirect?page=changes>
Changes: [tmill] Move relationLookup into a protected method so that implementers can do it differently (for training ML models - used by the ctakes-ade module). ------------------------------------------ Started by an SCM change Running as SYSTEM [EnvInject] - Loading node environment variables. Building remotely on H35 (ubuntu) in workspace <https://builds.apache.org/job/ctakes-trunk-package/ws/> Cleaning up <https://builds.apache.org/job/ctakes-trunk-package/ws/.> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dictionary-lookup-fast-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-preprocessor/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex-uima/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-gui/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-drug-ner/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-context-tokenizer/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-examples-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dictionary-lookup/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-chunker-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ne-contexts/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-lvg/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dictionary-lookup-fast/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ne-contexts-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dictionary-lookup-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-chunker/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-pos-tagger/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-tiny-rest/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dependency-parser-res-clear/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-clinical-pipeline/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-examples/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-template-filler/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-type-system/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-regression-test/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-smoking-status-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dependency-parser/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-side-effect/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-pos-tagger-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-side-effect-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex-web/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-clinical-pipeline-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-utils/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-core/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-distribution/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-drug-ner-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-core-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dependency-parser-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-smoking-status/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/resources> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dockhand/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-fhir/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-gui-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-lvg-res/target> Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/target> Updating http://svn.apache.org/repos/asf/ctakes/trunk at revision '2020-01-17T11:42:09.328 +0000' U ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/ae/RelationExtractorAnnotator.java A ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/eval/CopyFromGold.java At revision 1872915 Parsing POMs Downloaded artifact https://repo.maven.apache.org/maven2/org/cleartk/cleartk/2.0.0/cleartk-2.0.0.pom Modules changed, recalculating dependency graph Established TCP socket on 37879 maven3-agent.jar already up to date maven3-interceptor.jar already up to date maven3-interceptor-commons.jar already up to date [ctakes-trunk-package] $ /home/jenkins/tools/java/latest1.8/bin/java -Xmx4g -Xms4g -cp /home/jenkins/jenkins-slave/maven3-agent.jar:/home/jenkins/tools/maven/apache-maven-3.0.5/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /home/jenkins/tools/maven/apache-maven-3.0.5 /home/jenkins/jenkins-slave/remoting.jar /home/jenkins/jenkins-slave/maven3-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 37879 <===[JENKINS REMOTING CAPACITY]===> channel started Executing Maven: -B -f <https://builds.apache.org/job/ctakes-trunk-package/ws/pom.xml> -Dmaven.repo.local=/home/jenkins/jenkins-slave/maven-repositories/1 clean install -DskipTests=true [INFO] Scanning for projects... Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-http-lightweight/2.2/wagon-http-lightweight-2.2.pom [ERROR] The build could not read 1 project -> [Help 1] [ERROR] [ERROR] The project org.apache.ctakes:ctakes-ytex:4.0.1-SNAPSHOT (<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex/pom.xml)> has 1 error [ERROR] Unresolveable build extension: Plugin org.apache.maven.wagon:wagon-http-lightweight:2.2 or one of its dependencies could not be resolved: Failed to collect dependencies for org.apache.maven.wagon:wagon-http-lightweight:jar:2.2 (): Failed to read artifact descriptor for org.apache.maven.wagon:wagon-http-lightweight:jar:2.2: Could not transfer artifact org.apache.maven.wagon:wagon-http-lightweight:pom:2.2 from/to central (http://repo.maven.apache.org/maven2): Failed to transfer file: http://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-http-lightweight/2.2/wagon-http-lightweight-2.2.pom. Return code is: 501 , ReasonPhrase:HTTPS Required. -> [Help 2] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException [ERROR] [Help 2] http://cwiki.apache.org/confluence/display/MAVEN/PluginResolutionException No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES fhir support #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES ctakes-clinical-pipeline #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES common type system #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES dictionary lookup #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Constituency Parser #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » ctakes-examples-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Temporal Information Extraction #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources ctakes-chunker-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Regression-test #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Relation Extractor #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » ctakes-gui #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES document preprocessor #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources assertion #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources assertion-zoner #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Assertion's zoner #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources ne-contexts #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Dockhand #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Drug NER #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES YTEX Web #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES context dependent tokenizer #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources side-effect #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » ctakes-examples #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources dictionary-lookup-fast-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES dictionary lookup fast #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES named entity contexts #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES LVG lexical tools #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources smoking-status #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES part-of-speech tagger #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Side Effects #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES template filler #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES chunker #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Tiny Rest Service #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources dependency-parser clearNLP #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES utils #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources drug-ner #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES core #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Dependency Parser #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Distribution #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources coreference #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES CoReference Resolver #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Assertion #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » ctakes-clinical-pipeline-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources ctakes-ytex-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources dictionary-lookup #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources temporal #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » ctakes-gui-res #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources lvg #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES YTEX #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources relation-extractor #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources constituency-parser #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources core #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources dependency-parser #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Smoking Status #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES Resources pos-tagger #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES YTEX UIMA #701' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. channel stopped