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Changes: [tmill] Pulled out a class from an eval script so it can be used for relation extractors in other modules. ------------------------------------------ [...truncated 397.71 KB...] A ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency A ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser A ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models AU ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/thyme.bin AU ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/sharpacq-3.1.bin AU ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/sharpacq-1.5.bin A ctakes-constituency-parser-res/src/test A ctakes-constituency-parser-res/LICENSE A ctakes-context-tokenizer A ctakes-context-tokenizer/pom.xml A ctakes-context-tokenizer/src A ctakes-context-tokenizer/src/main A ctakes-context-tokenizer/src/main/java A ctakes-context-tokenizer/src/main/java/org A ctakes-context-tokenizer/src/main/java/org/apache A ctakes-context-tokenizer/src/main/java/org/apache/ctakes A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java A ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context A ctakes-context-tokenizer/src/test A ctakes-context-tokenizer/src/test/java A ctakes-context-tokenizer/src/test/java/org A ctakes-context-tokenizer/src/test/java/org/apache A ctakes-context-tokenizer/src/test/java/org/apache/ctakes A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer A ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae AU ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae/TestContextDependentTokenizerAnnotator.java A ctakes-context-tokenizer/desc A ctakes-context-tokenizer/desc/analysis_engine A ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml A ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml A ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml A ctakes-context-tokenizer/LICENSE A ctakes-context-tokenizer/data A ctakes-context-tokenizer/data/test A ctakes-context-tokenizer/data/test/output A ctakes-context-tokenizer/resources A ctakes-context-tokenizer/resources/launch A ctakes-context-tokenizer/README A ctakes-drug-ner-res A ctakes-drug-ner-res/pom.xml A ctakes-drug-ner-res/src A ctakes-drug-ner-res/src/main A ctakes-drug-ner-res/src/main/resources A ctakes-drug-ner-res/src/main/resources/org A ctakes-drug-ner-res/src/main/resources/org/apache A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/lookup/LookupDesc_DrugNER.xml A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer A ctakes-drug-ner-res/src/main/resources/org/apache/ctakes/drugner/tokenizer/hyphen_freq.txt A ctakes-drug-ner-res/src/test A ctakes-drug-ner-res/LICENSE A ctakes-ne-contexts-res A ctakes-ne-contexts-res/pom.xml A ctakes-ne-contexts-res/src A ctakes-ne-contexts-res/src/main A ctakes-ne-contexts-res/src/main/resources A ctakes-ne-contexts-res/src/main/resources/org A ctakes-ne-contexts-res/src/main/resources/org/apache A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/pipeline/NeContextsSubPipe.piper A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc A ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml A ctakes-ne-contexts-res/src/test A ctakes-ne-contexts-res/LICENSE A ctakes-pos-tagger-res A ctakes-pos-tagger-res/pom.xml A ctakes-pos-tagger-res/src A ctakes-pos-tagger-res/src/main A ctakes-pos-tagger-res/src/main/resources A ctakes-pos-tagger-res/src/main/resources/org A ctakes-pos-tagger-res/src/main/resources/org/apache A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp AU ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp/mayo-en-pos-1.3.0.jar AU ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/mayo-pos.zip A ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/README A ctakes-pos-tagger-res/src/test A ctakes-pos-tagger-res/LICENSE A ctakes-side-effect-res A ctakes-side-effect-res/pom.xml A ctakes-side-effect-res/src A ctakes-side-effect-res/src/main A ctakes-side-effect-res/src/main/resources A ctakes-side-effect-res/src/main/resources/org A ctakes-side-effect-res/src/main/resources/org/apache A ctakes-side-effect-res/src/main/resources/org/apache/ctakes A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/lookup A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/lookup/LookupDesc_sideEffect.xml A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/lookup/LookupDesc_sideEffectUMLS.xml A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/lookup/sideEffect_dictionary.txt A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/lookup/additionalNE_dictionary.csv A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/classifier A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/classifier/libsvm_model_onWholeSet A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/data A ctakes-side-effect-res/src/main/resources/org/apache/ctakes/sideeffect/data/sentenceLevelMetaKeywords.txt A ctakes-side-effect-res/src/test A ctakes-side-effect-res/LICENSE A ctakes-smoking-status-res A ctakes-smoking-status-res/pom.xml A ctakes-smoking-status-res/src A ctakes-smoking-status-res/src/main A ctakes-smoking-status-res/src/main/resources A ctakes-smoking-status-res/src/main/resources/org A ctakes-smoking-status-res/src/main/resources/org/apache A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/KuRuleBasedClassifierAnnotator.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ProductionPostSentenceAggregate_step2_libsvm.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/SmokingStatusDictionaryLookupAnnotator.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ArtificialSentenceAnnotator.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ProductionPostSentenceAggregate_step1.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/SentenceAdjuster.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/PcsClassifierAnnotator_libsvm.xml A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/KU A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/KU/keywords.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/KU/unknown_words.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/nonsmoker.dictionary A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/context A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/context/negationContradictionWords.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/context/boundaryData.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/smoker.dictionary A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/PCS A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/PCS/stopwords_PCS.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/PCS/pcs_libsvm-2.91.model A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/PCS/keywords_PCS.txt A ctakes-smoking-status-res/src/main/resources/org/apache/ctakes/smokingstatus/data/SmokingStatusLookupConfig.xml A ctakes-smoking-status-res/src/test A ctakes-smoking-status-res/LICENSE A ctakes-template-filler AU ctakes-template-filler/pom.xml A ctakes-template-filler/desc A ctakes-template-filler/desc/analysis_engine AU ctakes-template-filler/desc/analysis_engine/AggregateTemplateFiller.xml AU ctakes-template-filler/desc/analysis_engine/RelationExtractorAggregateWithoutOrangeBook.xml AU ctakes-template-filler/desc/analysis_engine/TemplateFillerAnnotator.xml A ctakes-template-filler/src A ctakes-template-filler/src/main A ctakes-template-filler/src/main/java A ctakes-template-filler/src/main/java/org A ctakes-template-filler/src/main/java/org/apache A ctakes-template-filler/src/main/java/org/apache/ctakes A ctakes-template-filler/src/main/java/org/apache/ctakes/template A ctakes-template-filler/src/main/java/org/apache/ctakes/template/filler A ctakes-template-filler/src/main/java/org/apache/ctakes/template/filler/ae AU ctakes-template-filler/src/main/java/org/apache/ctakes/template/filler/ae/TemplateFillerAnnotator.java A ctakes-template-filler/src/main/resources A ctakes-template-filler/src/test A ctakes-template-filler/src/test/java A ctakes-template-filler/src/test/resources A README AU KEYS A NOTICE A LICENSE U . At revision 1872873 Parsing POMs Downloaded artifact https://repo.maven.apache.org/maven2/org/cleartk/cleartk/2.0.0/cleartk-2.0.0.pom Modules changed, recalculating dependency graph Established TCP socket on 40867 maven3-agent.jar already up to date maven3-interceptor.jar already up to date maven3-interceptor-commons.jar already up to date [ctakes-trunk-package] $ /home/jenkins/tools/java/latest1.8/bin/java -Xmx4g -Xms4g -cp /home/jenkins/jenkins-slave/maven3-agent.jar:/home/jenkins/tools/maven/apache-maven-3.0.5/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /home/jenkins/tools/maven/apache-maven-3.0.5 /home/jenkins/jenkins-slave/remoting.jar /home/jenkins/jenkins-slave/maven3-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar 40867 <===[JENKINS REMOTING CAPACITY]===> channel started Executing Maven: -B -f <https://builds.apache.org/job/ctakes-trunk-package/ws/pom.xml> -Dmaven.repo.local=/home/jenkins/jenkins-slave/maven-repositories/1 clean install -DskipTests=true [INFO] Scanning for projects... Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-http-lightweight/2.2/wagon-http-lightweight-2.2.pom [ERROR] The build could not read 1 project -> [Help 1] [ERROR] [ERROR] The project org.apache.ctakes:ctakes-ytex:4.0.1-SNAPSHOT (<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-ytex/pom.xml)> has 1 error [ERROR] Unresolveable build extension: Plugin org.apache.maven.wagon:wagon-http-lightweight:2.2 or one of its dependencies could not be resolved: Failed to collect dependencies for org.apache.maven.wagon:wagon-http-lightweight:jar:2.2 (): Failed to read artifact descriptor for org.apache.maven.wagon:wagon-http-lightweight:jar:2.2: Could not transfer artifact org.apache.maven.wagon:wagon-http-lightweight:pom:2.2 from/to central (http://repo.maven.apache.org/maven2): Failed to transfer file: http://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-http-lightweight/2.2/wagon-http-lightweight-2.2.pom. Return code is: 501 , ReasonPhrase:HTTPS Required. -> [Help 2] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException [ERROR] [Help 2] http://cwiki.apache.org/confluence/display/MAVEN/PluginResolutionException No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES fhir support #700' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. No mail will be sent out, as 'ctakes-trunk-package » Apache cTAKES ctakes-clinical-pipeline #700' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts. 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