I am using Eclipse Juno and the latest m2e and wtp plugins for that version. We recently started using war overlays in my project and are having a lot of difficulty within the workspace. If I do a maven update, project clean, and start from scratch, the app will start up fine. After that, if I try to publish any changes (doesn't need to be related to the overlay projects), I get the following error. The only way I have gotten rid of it is by going back through the update+clean rain dance and then doing a server clean.
Any clue as to what is going wrong? Thanks! The publish encountered some problems and the application may not have been installed or it may have been successfully installed but was unable to start. View the Details to display the exceptions and server logs that occurred during the publish. ========web-ear ======== The application did not update: The application did not update: For details about the failure, refer to the Console view to see the log output of the server. . [11/26/13 16:14:23:633 EST] 0000021f annotations I AroundInvokeMergeAction mergeMethodTarget Could not locate an EJB reference for Interceptor [ com.adp.wfn.system.service.impl.WFNInterceptor ] [11/26/13 16:14:26:750 EST] 00000223 annotations I AroundInvokeMergeAction mergeMethodTarget Could not locate an EJB reference for Interceptor [ com.adp.wfn.system.service.impl.WFNInterceptor ] [11/26/13 16:14:30:112 EST] 00000223 annotations I AroundInvokeMergeAction mergeMethodTarget Could not locate an EJB reference for Interceptor [ com.adp.wfn.system.service.impl.WFNInterceptor ] [11/26/13 16:14:32:376 EST] 00000223 SystemErr R org.eclipse.jst.j2ee.commonarchivecore.internal.exception.SaveFailureException: m2e-wtp/overlays/web-resources-6.0.0.5-SNAPSHOT.war Stack trace of nested exception: java.io.FileNotFoundException: File [ m2e-wtp/overlays/web-resources-6.0.0.5-SNAPSHOT.war ] not found in archive [web-process-6.0.0.5-SNAPSHOT.war ] at [ /home/dev/WAS7.0.0.27/WebSphere70b32/AppServer/profiles/TEST/wstemp/wstemp/app_14296435c35/mrg/web-process-6.0.0.5-SNAPSHOT.war] at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.DirectoryLoadStrategyImpl.basicGetInputStream(DirectoryLoadStrategyImpl.java:1009) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.DirectoryLoadStrategyImpl.getInputStream(DirectoryLoadStrategyImpl.java:923) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ContainerImpl.primGetInputStream(ContainerImpl.java:599) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.primGetInputStream(ArchiveImpl.java:2022) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.FileImpl.getInputStream(FileImpl.java:179) at org.eclipse.jst.j2ee.commonarchivecore.internal.helpers.FileIteratorImpl.getInputStream(FileIteratorImpl.java:77) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:540) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.saveFiles(SaveStrategyImpl.java:505) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:235) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.save(ArchiveImpl.java:2696) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ModuleFileImpl.save(ModuleFileImpl.java:507) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:603) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.ZipStreamSaveStrategyImpl.save(ZipStreamSaveStrategyImpl.java:231) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:525) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.saveFiles(SaveStrategyImpl.java:505) at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:235) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.save(ArchiveImpl.java:2696) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ModuleFileImpl.save(ModuleFileImpl.java:507) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.saveAsNoReopen(ArchiveImpl.java:2916) at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.saveAs(ArchiveImpl.java:2736) at com.ibm.ws.management.application.task.FileMergeTask.update(FileMergeTask.java:343) at com.ibm.ws.management.application.task.FileMergeTask.performTask(FileMergeTask.java:148) at com.ibm.ws.management.application.SchedulerImpl.run(SchedulerImpl.java:294) at java.lang.Thread.run(Thread.java:738) [11/26/13 16:14:32:376 EST] 00000223 SystemErr R Stack trace of nested exception: [11/26/13 16:14:32:376 EST] 00000223 SystemErr R java.io.FileNotFoundException: File [ m2e-wtp/overlays/web-resources-6.0.0.5-SNAPSHOT.war ] not found in archive [web-process-6.0.0.5-SNAPSHOT.war ] at [ /home/dev/WAS7.0.0.27/WebSphere70b32/AppServer/profiles/TEST/wstemp/wstemp/app_14296435c35/mrg/web-process-6.0.0.5-SNAPSHOT.war] [11/26/13 16:14:32:376 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.DirectoryLoadStrategyImpl.basicGetInputStream(DirectoryLoadStrategyImpl.java:1009) [11/26/13 16:14:32:376 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.DirectoryLoadStrategyImpl.getInputStream(DirectoryLoadStrategyImpl.java:923) [11/26/13 16:14:32:376 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ContainerImpl.primGetInputStream(ContainerImpl.java:599) [11/26/13 16:14:32:376 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.primGetInputStream(ArchiveImpl.java:2022) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.FileImpl.getInputStream(FileImpl.java:179) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.helpers.FileIteratorImpl.getInputStream(FileIteratorImpl.java:77) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:540) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.saveFiles(SaveStrategyImpl.java:505) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:235) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.save(ArchiveImpl.java:2696) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ModuleFileImpl.save(ModuleFileImpl.java:507) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:603) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.ZipStreamSaveStrategyImpl.save(ZipStreamSaveStrategyImpl.java:231) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:525) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.saveFiles(SaveStrategyImpl.java:505) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.strategy.SaveStrategyImpl.save(SaveStrategyImpl.java:235) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.save(ArchiveImpl.java:2696) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ModuleFileImpl.save(ModuleFileImpl.java:507) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.saveAsNoReopen(ArchiveImpl.java:2916) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at org.eclipse.jst.j2ee.commonarchivecore.internal.impl.ArchiveImpl.saveAs(ArchiveImpl.java:2736) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at com.ibm.ws.management.application.task.FileMergeTask.update(FileMergeTask.java:343) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at com.ibm.ws.management.application.task.FileMergeTask.performTask(FileMergeTask.java:148) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at com.ibm.ws.management.application.SchedulerImpl.run(SchedulerImpl.java:294) [11/26/13 16:14:32:377 EST] 00000223 SystemErr R at java.lang.Thread.run(Thread.java:738) -James ---------------------------------------------------------------------- This message and any 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