FYI: 4.6.2 contains a bug related to thread affinity setting which will lead to a considerable performance loss (I;ve seen 35%) as well as often inconsistent performance - especially with GPUs (case in which one would run many OpenMP threads/rank). My advice is that you either use the code from git or wait for 4.6.3.
Cheers, -- Szilárd On Thu, Jul 4, 2013 at 11:23 AM, Albert <mailmd2...@gmail.com> wrote: > On 07/04/2013 11:18 AM, Mark Abraham wrote: >> >> No idea. I do not think there is any need for you to use >> BUILD_SHARED_LIBS=OFF, and it could well be the problem. >> >> Mark > > > thank you all the same. > > I found the problem, there is a subdirectory in cuda5.0: > > /export/cuda5.0/cuda > > the problem solved after I redirect the path into above path. > > best > Albert > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
