Hi,
I'm having the same warning, would also be interested in what it means.
Additionally, I get different results if I use a tpr instead of a gro
file in the -s option, using the same trajectory with -f. The results
are completely different, for the gro file I get 42 while for the tpr
file I get 2 clusters.
Does anybody know why this is the case?
Cheers
Sabine
On 05/10/2013 04:33 PM, Preeti Choudhary wrote:
hello everyone
I am trying to cluster my data using g_cluster.I simulated the whole
protein. I did the g_cluster analysis with only certain region of the
protein which I specified using an index file.The program runs fine and
gives 1 cluster.My concern is the warning it gives which states that :-
WARNING: rmsd minimum 0 is below lowest rmsd value 0.0247473
what exactly this warning means ???
-thanks
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