Hi I want to study the interaction between a peptide and a lipid bilayer, with the peptide initialy outside de bilayer. Is correct to choose only "bilayer" and "SOL_ions" as comm-groups ? because grompp complain about that with a warning: some atoms are not part of any center of mass motion removal group. This may lead to artifacts.
any help would be very appreciated. best regards, Facundo -- View this message in context: http://gromacs.5086.n6.nabble.com/comm-grps-tp5005677.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
