Szilárd, thanks for suggestion. Indeed I've noticed that versions of all packages in classic debian are older in comparison to debian mint ( despite I've done maximum upgrade of the system via apt). Tomorrow I'll try to install newest gcc and glibc and re-install gromacs.
James 2013/1/22 Szilárd Páll <szilard.p...@cbr.su.se>: > On Tue, Jan 22, 2013 at 12:45 PM, James Starlight > <jmsstarli...@gmail.com>wrote: > >> Szilárd, >> >> Today I've tried to re-install cuda+gromacs and do apt-get >> distr-upgrade but the same error was obtained during gromacs >> > > I'm don't see how does the distribution upgrade relate to the issues you > had (except if you have updated glibs to a newer version which is *still* > incompatible with libcuda. You should probably try getting a more recent > glibc and GCC version, one that libcuda is linked against. However, I'm not > sure what the source of your problem is, so I can't suggest a certain > solution. > >> compilation. By the way where I could provide --add-needed option ? > > CMAKE_EXE_LINKER_FLAGS=-wl,--add-needed > > Cheers, > Szilárd > > >> >> >> James >> >> >> 2013/1/21 Szilárd Páll <szilard.p...@cbr.su.se>: >> > Szilárd >> -- >> gmx-users mailing list gmx-users@gromacs.org >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> * Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> * Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to gmx-users-requ...@gromacs.org. >> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >> > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
