Oh, Justin's right. So I was wrong in my first mail, as well as in my mental picture... So fitting all to all is default... Terribly sorry :$
Tsjerk On Jan 24, 2012 12:05 PM, "Justin A. Lemkul" <jalem...@vt.edu> wrote: Víctor wrote: > > I've having some problems with use of the option '-fitall'. > > The command I'm ... The -fitall option is set to 'yes' by default, so invoking it explicitly makes no difference. > Furthermore, the rmsd.xpm file represents a non-symetric matrix, which is not what I expected...... I can't explain this. Perhaps someone else can offer insight. -Justin > Thanks in advance, > Víctor > > -- > > Víctor Gil Sepúlveda > E. Informatica - FIB - UPC > -- ==============================**========== Justin A. Lemkul Ph.D. Candidate ICTAS Doctoral Scholar MILES-IGERT Trainee Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080 http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> ==============================**========== -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> Please search the archive at http://www.gromacs.org/** Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists>
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