Hello buddies, I'm a very beginner in gromacs and I just got a trick but simple situation (for you :D). After the installation of my gromacs on ubuntu 11.10 I opened the .bashrc file and put the following code in the following place as instructed by installation session on the webpage:
.BASHRC file # Add an "alert" alias for long running commands. Use like so: # sleep 10; alert alias alert='notify-send --urgency=low -i "$([ $? = 0 ] && echo terminal || echo error)" "$(history|tail -n1|sed -e '\''s/^\s*[0-9]\+\s*//;s/[;&|]\s*alert$//'\'')"' # Alias definitions. # You may want to put all your additions into a separate file like # ~/.bash_aliases, instead of adding them here directly. # See /usr/share/doc/bash-doc/examples in the bash-doc package. if [ -f ~/.bash_aliases ]; then . ~/.bash_aliases fi #this should be an access to gromacs source . /usr/local/gromacs/bin/GMXRC # enable programmable completion features (you don't need to enable # this, if it's already enabled in /etc/bash.bashrc and /etc/profile # sources /etc/bash.bashrc). if [ -f /etc/bash_completion ] && ! shopt -oq posix; then . /etc/bash_completion fi I already tried using . /usr/local/gromacs/GMXRC in the begin and also just /usr/local/gromacs/GMXRC (without the point) and even thereafter I couldn't run the program. Unfortunately I really don't know what to do I've already read the final installation instructions many times and tried to google something related but I had no luck. Please someone can provide me some light on this issue?? Thanks all of you. Willian Felix
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists