Hi Gromacs Users, I have calculated hydrogen bonds and collisions between my ligands and every single residue using g_hbond. Looking at the criteria adpoted by Gromacs I found impossible that number of hydrogen bonds were higher than number of collisions... And what is interesting in one of my residue I obtained result like this... All Hbonds with Glycine - 1872, All Collisions 704.
Does anyone know how is it possible? Steven
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