There is similar question in the mail list: http://www.mail-archive.com/gmx-users@gromacs.org/msg41737.html
Regards, Yuri 2011/8/16 גדעון לפידות <glapid...@gmail.com> > Thanks for your replies. > I would like to clarify regarding my first questionn. I don't want a g_dist > matrix. I would like to get a covariance matrix where the values correspond > to absolute distance and not dived into different dimensions. for example > say I have a protein with 100 aa and I run g_covar only on Ca I'll get a > 300X300 covariance matrix instead of a 100X100 matrix which is what I want. > is there any built in command in Gromacs that will give me this? > > Thanks, > Gideon > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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