Lateral pressure is a function of z-distance, maybe you can try simulations using different surface tension, which is the integration of lateral pressure.
Cheers, Jianguo ________________________________ From: KONG Xian <xiansh...@gmail.com> To: gmx-users@gromacs.org Sent: Wednesday, 27 July 2011 10:58:56 Subject: [gmx-users] How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? Dear all: I am working on a research to study whether the Lateral pressure profile influence the protein function. To get different lateral pressure profile, I used Parinello-Rahman P coupling method and anisotropic pressure coupling with different p_ref values(such as 0.9bar, 1bar, 1.1bar, .,2bar) in xy. I wonder whether this method feasible. If it is not feasible, could anyone please give me a hint on how to do it. Thank you KONG Xian __________ Information from ESET NOD32 Antivirus, version of virus signature database 6327 (20110726) __________ The message was checked by ESET NOD32 Antivirus. http://www.eset.com
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