Hi Bipin, You have three coordinates per residue, hence a 3Nx3N matrix.
Cheers, Tsjerk On Jun 25, 2011 4:40 PM, "bipin singh" <bipinel...@gmail.com> wrote: Hello, I have calculated the covariance matrix for C-alpha atoms(179 aa) only,but after plotting the correlation, I have observed that it is of 537X537,instead of179X179.Please suggest me how to get correlation between the C-alpha atoms only. On Fri, Jun 24, 2011 at 22:54, Tsjerk Wassenaar <tsje...@gmail.com> wrote: > > Hi Bipin, > > Read... -- ----------------------- *Regards,* Bipin Singh -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
