Thanks, so LDFLAGS /home/user/gmx and CPPFLAGS /home/user/gmx for example?
On Tue, Jan 11, 2011 at 2:19 PM, Justin A. Lemkul <jalem...@vt.edu> wrote: > > > Sergio Manzetti wrote: > >> Hi Justin, it was a blank ./configure >> >> >> > I don't know why a standard location like /usr/lib isn't be detected as > containing the libraries, but you can set LDFLAGS and CPPFLAGS accordingly > so that the libraries and headers are found. See the installation > instructions for details. > > -Justin > > >> On Tue, Jan 11, 2011 at 2:03 PM, Justin A. Lemkul <jalem...@vt.edu<mailto: >> jalem...@vt.edu>> wrote: >> >> >> >> Sergio Manzetti wrote: >> >> Dear users, I have installed FFTW3 successfully, and confirmed >> its location using locate: >> >> >> /home/m/Desktop/gromacs-4.5.3/src/mdlib/gmx_fft_fftw3.c >> /usr/lib/libfftw3.so.3 >> /usr/lib/libfftw3.so.3.2.4 >> /usr/lib/libfftw3_threads.so.3 >> /usr/lib/libfftw3_threads.so.3.2.4 >> /usr/lib/libfftw3f.so.3 >> /usr/lib/libfftw3f.so.3.2.4 >> /usr/lib/libfftw3f_threads.so.3 >> /usr/lib/libfftw3f_threads.so.3.2.4 >> /usr/lib/libfftw3l.so.3 >> /usr/lib/libfftw3l.so.3.2.4 >> /usr/lib/libfftw3l_threads.so.3 >> /usr/lib/libfftw3l_threads.so.3.2.4 >> /usr/share/doc/libfftw3-3 >> /usr/share/doc/libfftw3-3/NEWS.gz >> /usr/share/doc/libfftw3-3/README >> /usr/share/doc/libfftw3-3/README.Debian >> /usr/share/doc/libfftw3-3/changelog.Debian.gz >> /usr/share/doc/libfftw3-3/changelog.gz >> /usr/share/doc/libfftw3-3/copyright >> /var/cache/apt/archives/libfftw3-3_3.2.2-1_i386.deb >> /var/lib/dpkg/info/libfftw3-3.list >> /var/lib/dpkg/info/libfftw3-3.md5sums >> /var/lib/dpkg/info/libfftw3-3.postinst >> /var/lib/dpkg/info/libfftw3-3.postrm >> /var/lib/dpkg/info/libfftw3-3.shlib >> >> >> However, when I try installing Gromacs 4.5.3 the -/configure >> step yields: >> >> configure: error: Cannot find fftw3f library >> >> >> What am I doing incorrectly? >> >> >> Without seeing the command you gave to configure, it's impossible to >> say. >> >> -Justin >> >> Sergio >> >> >> -- ======================================== >> >> Justin A. Lemkul >> Ph.D. Candidate >> ICTAS Doctoral Scholar >> MILES-IGERT Trainee >> Department of Biochemistry >> Virginia Tech >> Blacksburg, VA >> jalemkul[at]vt.edu <http://vt.edu> | (540) 231-9080 >> >> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin >> >> ======================================== >> -- gmx-users mailing list gmx-users@gromacs.org >> <mailto:gmx-users@gromacs.org> >> >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> Please don't post (un)subscribe requests to the list. Use the www >> interface or send it to gmx-users-requ...@gromacs.org >> <mailto:gmx-users-requ...@gromacs.org>. >> >> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >> >> >> > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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