I am beginner in the GROMACS I am trying to simulate a theorical model of a membrane protein in explicit
lipid bilayer membrane environment (DMPC or POPC), I have the pdb files of this protein and membrane , I have to topolies files this lipids (dmpc.ip or popc.itp). How we can create merged topology of lipid and protein and do simulation step by step. Anybody could help ? thank you very much !
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