Hi, you should probably do:
perl HB.pl -s .pdb -map .xpm -index .xpm More details are written inside the perl script. Cheers, Carla On Tue, Nov 23, 2010 at 4:32 PM, leila karami <karami.lei...@gmail.com>wrote: > Dear Justin > > I study simulation of pr-dna complex. I want to know the percentage of > existence of each hbond during my trajectory. > I searched in previous lists. I want to use Perl script you offered to > carla jamous: > http://lists.gromacs.org/pipermail/gmx-users/2010-October/054727.html > > I'm biginner in using of Perl script, when I use your Perl script, > > Execution of ./HB.pl aborted due to compilation errors. > > how to fix it? > > any help will highly appreciated. > > > > > > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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