Dear Mark, I have one more doubt. How to run "luck". If i run luck anywhere its says command not found.. my installed and binary directory cant find luck program. how to do? without checking luck shall i start to run demo?
On Wed, Oct 13, 2010 at 3:19 PM, Mark Abraham <mark.abra...@anu.edu.au>wrote: > On 13/10/2010 5:01 PM, Mark Abraham wrote: > > On 13/10/2010 4:55 PM, Sathish wrote: > > Dear Mark, > Thanks for your reply. In my server gromacs installed at > "local/gromacs". I have checked out point 8 as you mentioned. > It was working with this "source /local/gromacs/bin/GMXRC" command. > > > That's all you need to do, in every shell from which you want to use > GROMACS. Or, put that command in your shell login scripts (Google for > details). > > and also tried , entered "local/gromacs/bin" path and calling to GMXRC > but it shows error > > [r...@xxx bin]# GMXRC > /local/gromacs/bin/GMXRC: line 35: return: can only `return' from a > function > or > sourced script > /local/gromacs/bin/GMXRC: line 44: CSH:: command not found > /local/gromacs/bin/GMXRC.csh: line 8: syntax error near unexpected token > `setenv > ' > /local/gromacs/bin/GMXRC.csh: line 8: `if (! $?LD_LIBRARY_PATH) setenv > LD_LIBRAR > Y_PATH ""' > [r...@xxx bin]# > > This doesn't work, and shouldn't. > > And the only thing you should be doing as root are "make install" and "make > links" (if you want the latter). Otherwise you'll trash your system before > you know what you've done. > > Mark > > > kindly help me to fix this problem and luck is not working. > > It should, if the "source" command worked. > > Mark > > > > > > On Wed, Oct 13, 2010 at 12:57 PM, Mark Abraham <mark.abra...@anu.edu.au>wrote: > >> >> >> ----- Original Message ----- >> From: Sathish <sathisbioi...@gmail.com> >> Date: Wednesday, October 13, 2010 14:31 >> Subject: [gmx-users] Gromacs installation problem @ RHEL5.5 server >> To: gmx-users@gromacs.org >> >> > Dear all, >> > I have compiled and installed gromacs 4.5.1 on RHEL5.5 server. I have >> also installed openmpi-1.2.8, fftw-3.2.2 and gsl-1.11. After gromacs 4.5.1 >> installation did make tests and make links. Finally got message "GROMACS is >> installed under /root/software" and "binary executable installed >> /usr/local/bin". Utill this am not getting any errors. >> > Then i was tried to calling "luck" but get "command not found".I have >> searched the forum it says binary executable not in your path. >> > Am installing first time and need to know PATH is right which i given? >> Could anybody help me to solve this problem? >> > Advance thanks.. >> >> Check out point 8 of >> http://www.gromacs.org/Downloads/Installation_Instructions >> >> Mark >> -- >> gmx-users mailing list gmx-users@gromacs.org >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to gmx-users-requ...@gromacs.org. >> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >> > > > > -- > -- > Regards, > N. Sathishkumar, > > > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- -- Regards, N. Sathishkumar,
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