munu...@yahoo.com wrote:
Hi
I want to add acetyl group at the N and C terminal of my protein.
i.e. CH3-C=O NH QQQ NH CH3 by removing the NH3+ and COO- at the N and C
terminal.
Please suggest what steps I have to follow.
There are no programs in Gromacs that will do that. You may find some useful
programs here:
http://www.gromacs.org/Documentation/File_Formats/Coordinate_File#Sources
-Justin
regards
M. Baskar
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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