----- Original Message ----- From: you zou <zou....@live.com> Date: Friday, May 28, 2010 14:41 Subject: [gmx-users] add missing atom To: gmx-users@gromacs.org
> Hi everyone, > I have one question about adding atoms that are missing in residue. This atom > is OG in SER amino acid. I don't know how can I add this atom to my residue. > If I have to add this atom manually how can I find coordinates of that? Or If > there is server or software to do this I will be happy if you suggest me its.> If there are more than one or two residues or pieces missing, just use O or Pymol to mutate the residues to the same residues, and the saved pdb has all the missing atoms. Then do a quick EM run. Stephan Watkins -- Sicherer, schneller und einfacher. Die aktuellen Internet-Browser - jetzt kostenlos herunterladen! http://portal.gmx.net/de/go/chbrowser -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
