On 7/05/2010 7:11 PM, Anupam Nath Jha wrote:
Dear all
How can we calculate the rmsd between different monomers from of a protein. for
example I have a tetramer and I have to calculate the rmsd between chain A to B,
A to C and A to D with time.
I was trying using g_rms but couldn't do that.
g_rms does that, but we're not going to guess what you were doing wrong.
Tell us what you did and why it didn't work like you expected it to :-)
Mark
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