bharat gupta wrote:
here is the link for that tutorial ...


What link?

and one more thing  I wanna ask that in the tutorial he has asked to
download to .mdp file (like ions.mdp) . My doubt is .. I should know
the theory for creating such files for the system of my study ..

That's what the manual is for - 326 pages of things you need to know about MD simulations and how to use Gromacs effectively.

You still have yet to provide the command line that you are issuing that generates the error you're seeing and thus you won't get a resolution to the problem aside from, "You're probably not following directions."

-Justin



Bharat

--
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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