Hi Bharat, Besides the notes of Justin, which lysozyme tutorial? And for which GMX version was that tutorial written?
Tsjerk On Sat, Jan 30, 2010 at 12:53 PM, Justin A. Lemkul <jalem...@vt.edu> wrote: > > > bharat gupta wrote: >> >> Hi >> >> I am getting the follwing error while running the mdrun command given >> in the step six of the lysozyme tutorial :- >> >> >> Program mdrun, VERSION 4.0.7 >> Source code file: gmxfio.c, line: 737 >> >> Can not open file: >> topol.tpr >> ------------------------------------------------------- >> >> "This Doesn't Suck, It's a Black Hole !" (K.A. Feenstra) >> >> >> >> Can anybody tell me where i will find this topol.tpr file ??? > > You don't find it anywhere - you were surely supposed to create it with > grompp in the prior step. If some previous step failed then this input > wouldn't have been generated. Read all messages printed to the screen > carefully. > > -Justin > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list gmx-us...@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Computational Chemist Medicinal Chemist Neuropharmacologist -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
