Hello Chanel Could you send a copy of the PDB file. I think that the error is related with label atoms included in each force fiel parameter.
See you. > Hello, > I have recently made a pdb file using the Dundee PRODRG server. > However, when I try to use this pdb in gromacs, I receive an error message > that states: "DRG is not in the topology database." I have tried to use > the > available tutorial to solve this issue, but with not much success. Could > anyone give me a step by step procedure so that I can use the pdb I have > made > using PRODRG? > > Thanks, > Chanel King > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
