Hi gmx-users,

I am building a polymer and I've added the monomer unit to the .rtp file. The 
final structure appears with an undesired bond between the monomer units at the 
extremes of the polymer. 
How can I prevent the monomers at the end forming the bond?

I have read other post like 
http://www.mail-archive.com/gmx-users@gromacs.org/msg21133.html  but  can not 
avoid this problem . 

Thank you in advance

veduardo.

Lab. de  FisicoquĂ­mica Molecular

Facultas de Ciencias

Universidad de Chile

 


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