Dear all,
i am trying to simulation of dna-protein complex using
gromacs with amber port . I am using amber99 port with gromacs-4.0.3
version. I am facing problem in running pdb2gmx command .The error comes
like this-
-------------------------------------------------------
Program pdb2gmx, VERSION 4.0.3
Source code file: resall.c, line: 426
Fatal error:
Residue 'T' not found in residue topology database
Can anyone suggest me how can I overcome this problem .
Thanks a lot in advance.
Nitu sharma
Jawaherlal Nehru University
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