http://wiki.gromacs.org/index.php/Errors#Residue_.27XXX.27_not_found_in_ residue_topology_database
Catch ya, Dr. Dallas Warren Department of Pharmaceutical Biology and Pharmacology Pharmacy and Pharmaceutical Sciences, Monash University 381 Royal Parade, Parkville VIC 3010 [email protected] +61 3 9903 9167 --------------------------------- When the only tool you own is a hammer, every problem begins to resemble a nail. From: [email protected] [mailto:[email protected]] On Behalf Of nitu sharma Sent: Wednesday, 13 May 2009 5:25 PM To: [email protected] Subject: [gmx-users] problem in simulation of DNA-protein complex Dear all I am getting problem in running pdb2gmx command on DNA_protein file . The prblem is -------------------------------------------------------- Program pdb2gmx, VERSION 4.0.3 Source code file: resall.c, line: 426 Fatal error: Residue 'T' not found in residue topology database So , actually I am unable to understand what should I do to solve this . Is it possible to get DNA.itp file from anywhere .If anyone have Idea about this please help me. I really will be very thankful for him/her. Nitu sharma
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