Hi
I am new to Gromacs, I am using V3.3.3. I have run the MD simulation
(using explicit solvent) for 1ns for my protein of interest and also the
examples which has given in the Manual.
I am getting same kind of graph for the both proteins by plotting CA vs time.
The graph shows RMSD value lies in the range of 0.03-0.02. I dunno where i am
missing or is there any problem in v. 3.3.3
thanks
Bala
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