Am Mittwoch, den 19.11.2008, 08:36 -0600 schrieb Pete Meyer: > One way would be to convert the trajectory to a pdb file, load in > pymol and generate a series of png images (one for each state with an > appropriate view), then combine the png's with convert (imagemagick) > or ffpmeg into a movie. > > Doubtless there's a more elegant way to do it, though.
Yes, e.g one can load gromacs trajectories directly, when the vmd-plugins are enabled in pymol (during compilation). Best Martin _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php