One way would be to convert the trajectory to a pdb file, load in pymol and generate a series of png images (one for each state with an appropriate view), then combine the png's with convert (imagemagick) or ffpmeg into a movie.

Doubtless there's a more elegant way to do it, though.

Pete

On Nov 19, 2008, at 8:16 AM, Thomas Schlesier wrote:

Hi all,
Sorry that this question is not purely related to GRMOACS. Does anybody know an free program with which it is possible to save a trajektorie as a movie? With ngmx and VMD i can visualize the trajektorie but i can not
save it as a movie (with VMD only snapshots are possible).
Thanks for answers.
Thomas
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