On Tue, 2008-11-18 at 02:13 -0800, Nicholas Geraedts wrote: > Mark - I've followed the instructions on the wiki. The last step says > to email the mailing list, as I have done. I'm not sure about your > comment for not needing a complete make if we're looking for MPI. > There are situations where the program will be used in > single-processor mode, as well as MPI. I'm not too concerned with the > time it takes to compile all of this (it's only about 8 minutes for > the whole lot). > > Jussi - I'm trying to compile the packages myself since the pre-made > RPM's don't seem to install the libraries needed. Furthermore, the LAM > RPM would constantly complain about not being able to find gcc-g77 - a > package found in CentOS4 but not CentOS5 (it's now referred to as > compat-gcc-34-g77 - the names don't agree so rpm complains). Also, > installing LAM from yum fails to put the required binaries where they > belong! There's no lamboot, mpmirun, lamhalt, etc to be found anywhere > in the path. I've found that it's often much less of a headache if you > can find the source and start from scratch (this is the FreeBSD child > in me talking).
Don't use the binary RPMs from gromacs.org, just use Fedora / Fedora EPEL + yum as I instructed a couple of mails ago. You should never use rpm's compiled for another distribution or architecture when you have native ones available. -- ------------------------------------------------------ Jussi Lehtola, FM, Tohtorikoulutettava Fysiikan laitos, Helsingin Yliopisto [EMAIL PROTECTED], p. 191 50632 ------------------------------------------------------ Mr. Jussi Lehtola, M. Sc., Doctoral Student Department of Physics, University of Helsinki, Finland [EMAIL PROTECTED] ------------------------------------------------------ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
