On Mon, 2008-11-17 at 16:59 -0800, Nicholas Geraedts wrote: > I'm trying to get Gromacs installed on our systems, but I've been > running into one error after another. We are running CentOS5 x86-64 > with all the latest updates. > > > I've got the following packages downloaded > lam-7.1.4 > fftw-3.2 > gsl-1.11 > gromacs-4.0
Ugh. Why do you want to compile these yourself? Use the distribution packages, that way you always can tell what is installed on your system and upgrading is easy. 1. Enable the Fedora EPEL repository http://fedoraproject.org/wiki/EPEL/FAQ#howtouse 2. Currently Gromacs is only available in EPEL Testing, but will be pushed to EPEL Stable. Install Gromacs with # yum --enablerepo=epel-testing -y install gromacs gromacs-mpi This way you get single and double precision binaries with and without MPI support, and all the needed dependencies. 3. If you don't want Gromacs to be automatically updated with yum, put the line exclude = gromacs* in /etc/yum.conf. When you want to update Gromacs to the newest version available, remove the line and run # yum -y update -- ------------------------------------------------------ Jussi Lehtola, FM, Tohtorikoulutettava Fysiikan laitos, Helsingin Yliopisto [EMAIL PROTECTED], p. 191 50623 ------------------------------------------------------ Mr. Jussi Lehtola, M. Sc., Doctoral Student Department of Physics, University of Helsinki, Finland [EMAIL PROTECTED] ------------------------------------------------------ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
