Hi Sanjay, You searched maybe..., but not good enough. Anyway, suits me for knowing that it sometimes helps adding my name to the search query :p :p :p
http://www.gromacs.org/pipermail/gmx-users/2006-July/023049.html Hope it helps, Tsjerk On Thu, Sep 18, 2008 at 1:29 PM, <[EMAIL PROTECTED]> wrote: > dear groacs users > > I want to calculate r.m.s.i.p for exploring convergence of my system and > motions of two different proteins,i divided my trajectory in two equal > parts and did g_covar for getting eigenvectors and corresponding > eigenvector trjectory as trr file for C-alpha atom of 10 eigenvectors.even > i know how to calculate RMSIP by trr file in Matlab but it is more time > taking process because my system is quite large (509 residues).I need a > script or tools to calculate it. before writting this mail i searched in > gmx- mailing list and i did not find any script for same. > need your help! > > thanks in advance. > > sanjay upadhyay > research scholar > proein dynamics lab > IIT bombay India > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
