Hi,
RMSD is your just deviation of backbone from native stare while RMS fluctuation
shows the
per atom deviation throughout simulation.
regards,
Ravi Datta Sharma Lecturer, Bioinformatics,
Department of Microbiology,
CCS Unversity,
Meerut
--- On Sat, 6/9/08, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote:
From: [EMAIL PROTECTED] <[EMAIL PROTECTED]>
Subject: [gmx-users] g_energy
To: gmx-users@gromacs.org
Date: Saturday, 6 September, 2008, 2:41 PM
Hi,
how does it count the drift in g_energy? What is the equation? What is the
difference among fluct. and RMSD? Thanks, see you soon.
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