Hi, I calculated the electrostatic potential using g_potential across a large 416-lipid POPC bilayer from a 200 ps trajectory. The bilayer is well-hydrated, and has zero charge.
However, I get a very odd potential which starts off at 0.0 and ends at 0.6 V, but is not monotonically increasing all the time. I can attach a small 8 kb jpg if the admins allow it. Otherwise you might get an idea of the shape from the diagram below if it turns up right. The bilayer is between the points 2 and 2. Any tips why this might happen ? Thank you very much ! -Himanshu 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 2 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php