David,
Is there a way I can get 3.3 with bugfixes from CVS? This is really
what I want to do. For example, you just fixed some problems with
g_angle and g_dihedral that I reported, and I'm trying to figure out
how to get that from CVS without also upgrading to 3.3.1. (I am
hesitant to switch versions of GROMACS while in the middle of a
project, but I need the modifications to anadih.c).
Thanks,
David
On 8/29/06, David van der Spoel <[EMAIL PROTECTED]> wrote:
David Mobley wrote:
> David,
>
>> > The other possibility is I might be in the wrong branch or
>> > something... I just followed the instructions on the web page:
>> >
>> > cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs login
>> > cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs co gmx
>> > And then within the gmx directory:
>> > cvs update -A -r release-3-1-patches
>> >
>> > Should that give me the current CVS for 3.3.1? If so, any further
>> > suggestions?
>> no you're checking out the head branch and applying all the 3.3.1
>> patches to it, which will be pretty messy.
>>
>> you want to do
>> co -r release-3-3-patches gmx
>
> As I pointed out, the instructions I am following come straight from
> the web page (http://www.gromacs.org/gromacs/downloads/cvs-usage.html):
>
> $>cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs login
> Password:
> $>cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs co gmx
>
> This will create a "gmx" subdirectory with all the Gromacs sources. To
> create the configure script files you should now run the "./bootstrap"
> script in the gmx directory. To do this you might need to install or
> upgrade your versions of autoconf and automake to those provided on
> this site. Check the developer tools section in the menu to the left!
> If you don't give any special command you will check of the HEAD
> branch, which is the main development branch, heading for the next
> major Gromacs version. If you only want to check or work with the most
> recent bugfixes in the stable revision tree you should switch 'branch'
> to the patches for the stable version instead. This is easy; just
> write
>
> $>cvs update -A -r release-3-1-patches
>
> If the above are incorrect, you should change the web page.
>
will do. I don't know what the -A flag does...
> I would also note that when I follow this procedure, but replace
> "release-3-1-patches" with "release-3-3-patches", I get something that
> compiles with no problems.
>
> A further clarification request: does release-3-3-patches get me 3.3, or
> 3.3.1?
>
In fact we should call it 3.3.2 beta
Be careful though, we are still ironing out the latest bugs before release.
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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