editconf -h
editconf -translate ...
cat xxx.pdb >> yyy.pdb
and remove the TER and ENDMDL lines
Good luck,
Jochen
mahbubeh zarrabi wrote:
Dear gmx_users
I am trying to insert one alpha-helical peptide . I
created two pdbs, bilayer.pdb and peptide.pdb . how
can i were adjusted the peptide coordinates using
editconf to be at the desired vertical
position in the bilayer.
thanks
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--
************************************************
Jochen Hub
Max Planck Institute for Biophysical Chemistry
Computational biomolecular dynamics group
Am Fassberg 11
D-37077 Goettingen, Germany
Email: jhub[at]gwdg.de
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