Dear Gromacs community. I am just starting my first dynamics and wonder if you could help me with:
1. Want to use some graphical program to see the atoms moving. Can I use ngmx? What other programs are available?
2. This is the near the end of my .top file in the final MD step: #ifdef POSRES_WATER ; Position restraint for each water oxygen [ position_restraints ] ; i funct fcx fcy fcz 1 1 1000 1000 1000 #endif If I want the waters to be free, should I comment out these lines? Thank you, João. _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
