Dear Freesurfers, I am trying to run trac-all on Freesurfer 7.4.1 but I am obtaining this output:
eddy_openmp --imain=trac/R01121_SCAN/dmri/dwi_orig_las.nii.gz --mask=trac/R01121_SCAN/dmri/lowb_orig_las_brain_mask.nii.gz --bvecs=trac/R01121_SCAN/dmri/dwi_orig_las.bvecs --bvals=trac/R01121_SCAN/dmri/dwi_orig_las.bvals --acqp=trac/R01121_SCAN/dmri/acqp.txt --index=trac/R01121_SCAN/dmri/index.txt --data_is_shelled --out=trac/R01121_SCAN/dmri/dwi eddy_openmp: Command not found. Linux LAPTOP-OH2647G1 5.15.167.4-microsoft-standard-WSL2 #1 SMP Tue Nov 5 00:21:55 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux trac-preproc exited with ERRORS at Tue Dec 3 20:11:28 CET 2024 Can you please help me understand the problem? Is that related to my FSL version? Thank you, Valeria
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.