External Email - Use Caution Dear TRACULA experts,
I'm trying to run TRACULA for one subject (multiple scans, longitudinal) but I'm getting the following error. Is there a way to fix this? I attach the b-vals and b-vecs. eddy_openmp --imain=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/dwi_orig_las.nii.gz --mask=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/lowb_topup_brain_mask.nii.gz --bvecs=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/dwi_orig_las.bvecs --bvals=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/dwi_orig_las.bvals --acqp=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/acqp.txt --index=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/index.txt --data_is_shelled --topup=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/topup --out=/home/data/dsf4b/trc/sub-F4B002_2.long.sub-F4B002/dmri/dwi EDDY::: AcqPara::AcqPara: Unrealistic read-out time EDDY::: EddyHelperClasses.cpp::: EDDY::AcqPara::AcqPara(const ColumnVector&, double): Exception thrown EDDY::: Eddy failed with message EDDY::: ECScanClasses.cpp::: EDDY::ECScanManager::ECScanManager(const string&, const string&, const string&, const string&, const string&, const string&, const string&, const string&, EDDY::ECModel, EDDY::ECModel, const std::vector<unsigned int>&, const EDDY::PolationPara&, EDDY::MultiBandGroups, bool): Exception thrown The mentioned acquisition parameters are 0 -1 0 .000087629746 0 1 0 .000087629746 Thank you, Adriana -- _La información aquí contenida es para uso exclusivo de la persona o entidad de destino. Está estrictamente prohibida su utilización, copia, descarga, distribución, modificación y/o reproducción total o parcial, sin el permiso expreso de la Universidad de Antioquia, pues su contenido puede ser de carácter confidencial y/o contener material privilegiado. *La Universidad de Antioquia no se hace responsable por la información contenida en esta comunicación, el directo responsable es el egresado(a) que la firma como autor de la misma.* _ -- UdeA
dwi_orig.1.bvals
Description: Binary data
dwi_orig.1.bvecs
Description: Binary data
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.