Use orig.mgz

On 6/27/2024 9:47 PM, Quanjiang Liu wrote:

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  Sorry to bother you again. I want to know that the standard input to get the standard lh.seghead and rh.seghead. Is it the T1.mgz or the brain.mgz in the mri folder which is one of the output files of recon-all -all command.
Best,

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*发件人:* freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> 代表 Douglas N. Greve <dgr...@mgh.harvard.edu>
*发送时间:* 2024年6月27日 6:35
*收件人:* freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
*主题:* Re: [Freesurfer] The file absence problem of the recon-all -all output

        
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that has to be created with a separate process (mri_seghead)

On 6/26/2024 2:11 PM, Quanjiang Liu wrote:

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  Hi, I ran the recon-all -all command successfully. But the lh.seghead and rh.seghead didn't appear in my output folder. The attachment is the process record. Can you help to solve it?
  Sorry to bother.
Best

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