Hi Barbara,
Yes, you can use recon-all-clinical for the enhanced T1. But, the surface
reconstruction might fail and in that case, you might have to try running
SynthSR + recon-all.
Thank you,
Karthik
On Jun 13, 2024, at 1:30 AM, Barbara Bellenberg
<barbara.bellenb...@ruhr-uni-bochum.de> wrote:
External Email - Use Caution
Dear all,
I would like to use the recon-all-clinical pipeline with Gadolinium
contrast-enhanced 3D-T1 weighted images. Can you tell me if
recon-all-clinical is suitable for this purpose?
Thanks in adcance for your support!
Barbara
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.
