External Email - Use Caution Hello Freesurfer team,
I have flattened the occipital patch using "mris_flatten -w 10 subj04/surf/lh.occip.patch.3d subj04/surf/lh.occip.flattened" and it worked without any error and I can load the flattened patch in freeview. However, I have difficulty overlaying the activation map onto the flattened surface. Is the following command correct for this purpose? (mri_vol2surf --mov spmT_0001.nii --out subj04/surf/lh.bold.flat.mgz --reg fsl_reg.dat.lta --surf occip.flattened --hemi lh) Many thanks, Atena
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.