The way I have done this was do compute T1w images (MPRAGE) through
simulations, then run recon-all on that.
On 1/17/2024 11:55 AM, Maksim Slivka wrote:
External Email - Use Caution
Dear FS community,
Recently our lab started collecting 3D-QALAS (Cho et al., 2023). Using
this method, a quantitative T1map was constructed.
Trying to process this map, FS (v7.1.0) recon-all would output the
following error:
mri_cc: no WM voxels found with norm > 40 -- check skull stripping
I would like to ask if anyone here has experience in processing
quantitative T1maps with FS? Did you also run into that error? Were
you able to solve it?
I am looking forward to hearing from you.
Best regards,
Maksim Slivka
Head engineer
Center for Lifespan Changes in Brain and Cognition (LCBC)
Department of Psychology
University of Oslo
POB 1094 Blindern
0317 Oslo
Norway
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