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Thanks, YuJing
Tim 

    On Monday, December 18, 2023 at 07:38:14 AM CST, Huang, Yujing 
<yhuan...@mgh.harvard.edu> wrote:  
 
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The conversions between  tkrRas and scannerRAS are as following in Freesurfer:
 
  
 
tkrRAS = tkrvox2ras * inv(vox2ras) * scannerRAS
 
scannerRAS = vox2ras * inv(tkrvox2ras) * tkrRAS
 
  
 
Best,
 
  
 
Yujing
 
  
 
From: freesurfer-boun...@nmr.mgh.harvard.edu 
<freesurfer-boun...@nmr.mgh.harvard.edu>On Behalf Of Eric Tsang
Sent: Thursday, December 14, 2023 5:51 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Convert Scanner RAS to Vertex RAS
 
  
 
        External Email - Use Caution        
 
Dear All,
 
    I have great deal of trouble converting scanner RAS to vertex RAS. I have 
tried a couple of formula (in the following) which had failed to produce 
accurate coordinate.
 
  
 
[tkR tkA tkrS] = [ScannerRAS 1] / (vox2ras * inv(tkrvox2ras))
 
[tkR tkA tkrS] = [ScannerRAS 1] * inv(vox2ras0)
 
  
 
Both of these formula produced distorted coordinates. Please help!
 
  
 
Thanks,
 
Tim
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