Hi Corinna, the two files should give the same vol2vol output. Can you
send your command lines and pics of how they are different? The fscale
was only used by the old tkregister program to control the brightness.
doug
On 10/18/2023 1:44 PM, Corinna Bauer wrote:
External Email - Use Caution
Also - what does the "fscale" in the .lta file refer to?
On Wed, Oct 18, 2023 at 1:40 PM Corinna Bauer <corinna...@gmail.com>
wrote:
Thanks, Yujing.
Do you know why the output of mri_vol2vol would be different if
using the .lta vs the .dat file? And, if the .dat file was
verified/modified using tkregister2, would the .lta file also be
updated accordingly?
Thanks
Corinna
On Wed, Oct 18, 2023 at 1:35 PM Huang, Yujing
<yhuan...@mgh.harvard.edu> wrote:
Hi Corinna,
Here is an explanation of register.dat - *MailScanner has
detected a possible fraud attempt from "secure-web.cisco.com"
claiming to be*
https://surfer.nmr.mgh.harvard.edu/fswiki/RegisterDat
<https://secure-web.cisco.com/1LS1n_2IFmJqHufz_79O5K0eXjVtJxKQ0M6GnUF8GTuXJ1hdSOEcVCFw0R8yMW2Y1jgy8peX9T-wJQ3wK2BorIgXBj9SQO6MxLK3ix-2yrwMlihqiQOzEoHAmviNae3952L8fdk7MYa6sQQJKXTTdLP5wQ2vNtf_j38OOauga-zD9SdvPRc2oY1BY-xN_y-gHOCSBSwUQmdxnYQGGahqm2UQFD6jKJeqtTLBhV4hdDPkXGCMbiTYTXGizMklYCF2jyPoMKM3Oau76fV69ViR3BQnT22lkaONK3HyGMCcUckfJwCPvSDEpNjFD7zKGD0plVt7AGXzc5-xFqFm41YHwLQ/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FRegisterDat>
You can use lta_convert to convert it to .lta - *MailScanner
has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be*
https://ftp.nmr.mgh.harvard.edu/pub/docs/html/lta_convert.help.xml.html
<https://secure-web.cisco.com/12rpvh0XjUz2-jniVSUqU1AOUWpta2BodBDpKZEVJD4ENU0az5aprsFnxJ2Xq3EJljG4yku3hu6wouX8puqdN29uVnd8sNGzs8JxTjdzwsAq-aGkus8O94Lmmfrl3wWoRMxa1UxYl_yrFCHU0gR19TT_Ac-nLLZ_kkUc2hLFa6iqSxnlzi8vtoYLeR-xVZLD8fMWApj0lVt4OZ1RdySoyrigPKQczeFeFuIF1nfFHguD9X8OdW6ro7vbHilJaObjOditWRg59h3YWZPpJ_w_ptoQ4m4xYr0WC24_na0NDpMOrqhlxmOWIhYJU4fcoFONzP6wkK1g5-E6ct-kmF89Yaw/https%3A%2F%2Fftp.nmr.mgh.harvard.edu%2Fpub%2Fdocs%2Fhtml%2Flta_convert.help.xml.html>
Best,
Yujing
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of
*Corinna Bauer
*Sent:* Wednesday, October 18, 2023 1:07 PM
*To:* Mailing Freesurfer List <freesurfer@nmr.mgh.harvard.edu>
*Subject:* [Freesurfer] .lta vs .dat questions
* External Email - Use Caution *
Hi all,
Can someone please explain the difference between .lta and
.dat and why the registration looks different using the two
file types?
If bbregister outputs were already checked and edited (if
needed) using the .dat file, is there a way to convert it to .lta?
Thanks
Corinna
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
*MailScanner has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be*
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://secure-web.cisco.com/1cCURlH2rsF7a_rdopihVolJEJYrznX-K16dBDu_UZJVhBVLtCj81G12j-H9BhtvUwla42BLONtT9PDRNg-sM5L37LuFySBFMVho0240RcPN9eH-dfT3wqRguRVMe0euRm5gsR_ZSBrAnKj9R18oQraRUGBw19RM0MllJKpdLby_WYLwR9n-yOYCk8fUKbPDjfKVM2dLMLrVZ-mpRyZwypt4QVfl1amM5bZBi5h_RASo6lhIejVdTNpcRuFHyH1M8RQiv2k8GiNoojzqy2B4vP-L7WjPEcy2dBNHhJfuxX26dQdgo4XFM2vEvOWu-VzHzvoVOCQSc9cLP-vyJ6JXXSw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>
The information in this e-mail is intended only for the person
to whom it is addressed. If you believe this e-mail was sent
to you in error and the e-mail contains patient information,
please contact the Mass General Brigham Compliance HelpLine at
*MailScanner has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be*
https://www.massgeneralbrigham.org/complianceline
<https://secure-web.cisco.com/1WXM78vaVt7PvzqIf_iooZttprzGgfe5O9ArjWbEXjGqFtIRPK80Su176VZClBBzkooCQnEg7zJivrwAT3ZGnYK7ipSs1Kar6JqLhKo_1bDWBKaoU8mGr8hfQkaLxJ0Kmaww6E-_yfj01aihxH8UYWeOfHqupUa9cT-5mu_T9Zj4-F9Mf5hLBOy0M4Z_pEWZ7LqMGXz8k_5gncM4tKqCZqV8hZXAOg-yIJSQ7568gRV_rRulWnNeBZrGZ3vfT9E_GWotLZKLlyzjB1ZmfXYYBZE9fMlz6NgJV52guAH31YgMjc4UO7kUkhn9M6KbhxNvfC9vRdpjV1j43R-Gprv8YbA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>
<*MailScanner has detected a possible fraud attempt from
"secure-web.cisco.com" claiming to be*
https://www.massgeneralbrigham.org/complianceline
<https://secure-web.cisco.com/1WXM78vaVt7PvzqIf_iooZttprzGgfe5O9ArjWbEXjGqFtIRPK80Su176VZClBBzkooCQnEg7zJivrwAT3ZGnYK7ipSs1Kar6JqLhKo_1bDWBKaoU8mGr8hfQkaLxJ0Kmaww6E-_yfj01aihxH8UYWeOfHqupUa9cT-5mu_T9Zj4-F9Mf5hLBOy0M4Z_pEWZ7LqMGXz8k_5gncM4tKqCZqV8hZXAOg-yIJSQ7568gRV_rRulWnNeBZrGZ3vfT9E_GWotLZKLlyzjB1ZmfXYYBZE9fMlz6NgJV52guAH31YgMjc4UO7kUkhn9M6KbhxNvfC9vRdpjV1j43R-Gprv8YbA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>>
.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.